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Variant Calling (BWA-GATK) pipeline benchmark with Dell EMC Ready Bundle for...
13G/14G server performance comparisons with Dell EMC Isilon and Lustre StorageOverviewVariant calling is a process by which we identify variants from sequence data. This process helps determine if...
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Deep Learning Performance with Intel® Caffe - Training, CPU model choice and...
Authors: Alex Filby and Nishanth DandapanthulaHPC Engineering, HPC Innovation Lab, March 2018 OverviewTo get the most out of deep learning technologies requires careful attention to both hardware and...
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Cryo-EM – Relion benchmarks on Skylake
Optimized Relion Tests on Dell EMC PowerEdge C6420s with Dell EMC IsilonOverviewThe purpose of this blog is to validate the optimized Relion (for REgularised LIkelihood OptimizatioN) on Dell EMC...
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Dell EMC Ready Bundle for HPC Life Sciences - Reference Architectures 20180319
Refresh with 14th Generation serversDell EMC’s flexible HPC architecture for Life Sciences has been through a dramatic improvement with new Intel® Xeon® Scalable Processors. Dell EMC Ready Bundle for...
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Dell EMC Ready Bundle for HPC Life Sciences - Whitepaper 20180319
Refresh with 14th Generation serversDell EMC's flexible HPC architecture for Life Sciences has been through a dramatic improvement with new Intel® Xeon® Scalable Processors. Dell EMC Ready Bundle for...
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RNA-Seq pipeline benchmark with Dell EMC Ready Bundle for HPC Life Sciences
Deferentially Expressed Gene (DEG) Analysis with Tuxedo PipelineOverviewGene expression analysis is as important as identifying Single Nucleotide Polymorphism (SNP), InDel or chromosomal restructuring....
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De Novo Assembly with SPAdes
OverviewWe published the whitepaper, “Dell EMC PowerEdge R940 makes De Novo Aseembly easier”, last year to study the behavior of SOAPdenovo2 [1]. However, the whitepaper is limited to one De Novo...
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Collaboration Showcase: Dell EMC, TACC and Intel join forces on Stampede2...
Dell EMC Solutions, June 2018 Stampede2 system, is the result of collaboration between the Texas Advanced Computing Center (TACC), Dell EMC and Intel. Stampede2 consists of 1,736 Dell EMC PowerEdge...
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New NVIDIA V100 32GB GPUs, Initial performance results
Deepthi Cherlopalle, HPC and AI Innovation Lab. June 2018GPUs are useful for accelerating large matrix operations, analytics, deep learning workloads and several other use cases. NVIDIA introduced the...
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The Complexity of Learning Concept - Machine Learning in Genomics #1
How much data do we need to use a ML algorithm?Although this is the most common question, it is hard to answer since the amount of data mainly depends on how complex the learning concept is. In Machine...
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